Top San Juan Water Tours

See the city lights of Puerto Rico on this night kayak excursion on the Condado Lagoon. You’ll be in a clear bottom kayak equipped with LED lights, which you’ll turn on when the sun goes down. You can also paint your face and body with glow in the dark paint, so you’ll light up when the sun goes down, too. Have a blast seeing Puerto Rico in a whole new way.

Cruise by high-speed catamaran to Culebra from Fajardo for a fun-filled day trip swimming, beach combing and sunbathing on this island paradise. Spend your morning exploring the fascinating undersea creatures that populate the island’s coral reefs before enjoying a buffet lunch complete with rum punch and piña colada refreshments. Then take the afternoon to relax and swim on the area’s perfect sugar-sand beaches. Your excursion offers optional round-trip transportation from hotels in Old San Juan, Condado or Isla Verde.

Enjoy a new perspective on Old San Juan—and soak up Caribbean breezes and sunset views—aboard this evening boat tour. Following pickup at select local hotels, hop aboard the boat and find a comfortable seat on the deck. Then, spy highlights like Paseo De La Princesa, La Fortaleza, the San Juan City Walls, and more, all while the sun goes down. Light refreshments and alcoholic drinks are available on board.

Feel your adrenaline levels surge on an adventure tour to the El Yunque rain forest that includes soaring down a natural water slide, swimming under waterfalls, and a beach visit. This secluded spot is often overlooked by first-time visitors, but this tour gives you an inside glimpse into this local favorite haunt and comes with ample free time for you to relax.

Live out your island castaway fantasies aboard a luxury catamaran as you visit the deserted tropical island of Cayo Icacos from San Juan on this half-day sailing cruise. Sail into the aquamarine waters of the Caribbean, admiring views of the El Yunque mountains in the distance, before arriving at the nature preserve of Icacos for a leisurely day of swimming, snorkeling, lunch, and rum cocktails.

Go sailing and watch the sunset on a cruise from San Juan. Get great photo ops of Puerto Rico’s coastline and enjoy a comfortable sail on the Caribbean Sea. Your captain shares commentary about the region and provides complimentary drinks for your group of no more than six people.

Venture into the heart of Puerto Rico’s lush El Yunque rainforest during this small-group, half-day excursion from the San Juan area. Following morning pickup directly from your hotel, travel via air-conditioned vehicle into the forest, where you’ll go for a hike through the foliage, and learn more about the wildlife that calls El Yunque home. Next, swim in natural pool, go cliff-diving and rope-swinging if you dare, and admire the waterfalls.

There are many companies offering bio bay kayaking tours in Puerto Rico, but few that are led by a marine biologist guide. This guided tour from Fajardo ensures that you will have a deeper understanding of the phenomenon of bioluminescence as well as the ecosystems that you paddle through.

Set sail across the Caribbean on this 1.5-hour cruise from San Juan and enjoy unforgettable views of the Puerto Rican capital. Hop aboard a traditional sailboat and sip complimentary drinks as you cruise along the coast. Keep your camera to hand as you pass landmarks like San Juan Bay Marina and El Morro Fort, and spot dolphins and sea turtles swimming and playing around the boat.

This private sailboat charter from San Juan allows you to choose your own adventure. Sail around the bay and harbor of Old San Juan with an experienced captain and crew at the helm; you can choose to help sail or just relax and enjoy the ride. Bring whatever you prefer to sip on, as you watch the scenery. Ask any questions you may have about boating or the area.

Spend an adventurous day exploring two of Puerto’s most incredible natural wonders on this full-day excursion to hike in the El Yunque Rainforest and kayak at the island’s famed Bioluminescent Bay. Start your morning with a hike in the only tropical rain forest in the United States National Forest system, enjoying incredible mountain views and an optional waterfall swim to cool off. Then continue with a nighttime kayaking trip to the magical Bioluminescent Bay, which features a unique variety of plankton that glow when the water is touched or moved. Your Puerto Rico outdoor adventure also includes round-trip hotel transport, professional guide, and national park fees.

Culebra Snorkeling Adventure and Flamenco Beach Full Day Trip by Ferry. Snorkeling Age Requirement: 6+ Please Note: This ferry trip takes a minimum of 6 people to operate. If the tour does not reach this minimum then it can be rescheduled or canceled. Refund provided. Experience a Full Day Beach Hopping Tour with 1-hour Guided Snorkeling Experience & visiting World-Famous Flamenco Beach. Chance to swim with sea turtles and vibrant marine wildlife. Culebra Island is a snorkeler’s paradise, with the clearest waters, white sand beaches, and a great variety of sea life. Forget about the hard planning to get to Culebra Island, we make it simple for you. Itinerary reference: 7:15 am departure from San Juan after Hotel Pick-up to Ceiba Ferry Terminal. 8:30 am Ferry Check-in for departure 9:30 am Ferry departure from Ceiba to Culebra (45 mins. - 1 hr. Ferry Ride) 5:30 pm Ferry Return to Ceiba (1 hour and 30 minutes) You will be back in San Juan around 8:20 pm

Join a nighttime adventure into the waters of Laguna Grande as you visit the area’s amazing bioluminescent bay during this half-day excursion. Hop aboard a kayak as you paddle through the dense mangrove forests, heading to the area where the microscopic plankton puts on its surreal aquatic light show when you glide through the water. Your professional guide also tells you more about this fragile ecosystem and how visitors can help protect it.

Spend a day in the great outdoors during your time in Puerto Rico on this full-day adventure tour from San Juan. Join a small group and head to Luquillo Beach where you can swim and sunbathe. Next, head to the mountains to zipline through the lush jungles of the El Yunque Rainforest. End your day with a relaxing soak in a natural spring deep in the rain forest.

Sail the calm, azure waters of San Juan Bay at sunset during a cocktail cruise. Enjoy a warm welcome aboard from your friendly captain and crew, then settle in for a scenic ride. Watch the island coastline glide by as the sun sinks toward the horizon. Sip a complimentary rum punch or sparkling wine with your family and friends and listen as your captain points out landmarks like El Morro Fort and San Juan Gate. Arrive back at the dock in time to continue your evening in San Juan.

Kayak through the waters of Laguna Grande, a stunning bioluminescent lagoon, during this half-day tour from San Juan. Watch the glowing organisms in the water light up as your kayak slides through the water. Paddle through stands of mangrove trees and watch small fish dart through the water underneath your boat like shooting stars. Stop for a break with snacks and refreshments before heading back to your starting point. Use of all kayaking equipment and round-trip hotel transfers are included.

See the bioluminescent bay at La Parguera during this 8-hour tour from San Juan. Learn about this natural phenomenon through your guide's informative commentary during a boat trip through the mangrove forests and cays on the way to the bay. See tiny, harmless dinoflagellates that light up with the disturbance of the water. Round-trip transportation from selected areas in San Juan is included.

Explore the waters around San Juan on a miniboat, which holds a small group of up to four people. You'll get great, photo-worthy views of the shoreline and listen to guided commentary as you travel. A small group means personalized attention from your guide and an intimate atmosphere.

If you’re looking for something to do at night, but want an option that’s family-friendly, this Bio Bay Fajardo Nature Reserve Night Kayak Tour is a great choice. This nighttime kayak tour takes you to the Laguna Grande Nature Reserve so you can explore the area while learning about is unique ecosystem from your guide.

Explore the natural beauty of Puerto Rico with a small-group tour to El Yunque National Forest and Luquillo Beach. Get picked up at a meeting point in San Juan and set out for a half-day tour in an air-conditioned vehicle. Hike through the forest to reach a scenic waterfall and go swimming in a refreshing river. Continue on to visit Luquillo Beach, where lunch is available.

Enjoy a sunset cruise followed by an exploration of one of Puerto Rico’s bioluminescent bays during this full-day excursion from San Juan. Experience the glowing rays of the sun as they fade into the ocean. Then see a different type of glowing as you explore and swim in the bioluminescent waters near the town La Parguera.

The sparkling lights of bioluminescent plankton can only be seen once darkness falls, so this night kayaking adventure is the perfect way to see their fluorescent displays. Paddle through mangrove forests and Bio Bay while learning about the surrounding marine life from your guide. Ideal for paddlers of all abilities, this tour works with participants to ensure a comfortable experience, offering everything from extra seat padding to towing if needed.

This combination tour includes a visit to Luquillo Beach, El Yunque Rainforest and a nighttime kayaking tour of Laguna Grande, a bioluminescent bay. Stroll a walkway the winds through the treetops of the forest canopy. After a leisurely lunch (and time for shopping), travel to Laguna Grande to witness the unique phenomenon of bioluminescence.